Research 
Published Works:
- Brown, E. R., Chen, Y. Q. (2010) An imputation method for censored time-to-event with auxiliary information: analysis of the timing of mother-to-child transmission of HIV, Statistical Communications in Infectious Diseases, in press.
- Chen, Y. Q., Young, A., Brown, E. R., Chasela, C., Fiscus, S., Hoffman, I., Valentine, M., Emel, L., Taha, T. E. and Read, J. S. (2010) Risk factors for late postnatal mother-to-child transmission of human immunodeficiency virus type-1 in sub-Saharan Africa: assessing population attributable fractions. Journal of AIDS, 54, 311-316.
- Chen, Y. Q. (2010) Semiparametric regression in size-biased sampling, Biometrics, 66, 149-158.
- Chen, Y. Q. (2009) Review on "Statistical Design and Analysis of Stability Studies" by Chow.
Journal of the American Statistical Association, 485, 419-419.
- Kafulafula, G., Mwatha, A., Chen, Y. Q., Aboud, S., Martinson, F., Hoffman, I., Fawzi, W., Read, J. S., Valentine, M., Mwinga, K., Goldenberg, R. L. and Taha, T. E. (2009) Intrapartum Antibiotic Exposure and Early Neonatal Morbidity and Mortality in Africa, Pediatrics, 124, e137-e144.
- Mwinga, K., Vermund, S. H., Chen, Y. Q., Mwatha, A., Read, J. S., Urassa, W., Carpenetti, N., Valentine, M., Goldenberg, L. (2009) Selected hematologic and biochecmical measurements in African HIV-infected and uninfected pregnant women and their infants: the HIV Prevention Trials Network 024 Protocol. BMC Pediatrics, 9:49. doi:10.1186/1471-2431-9-49.
- Chen, Y. Q. (2008) Attributable risk. Encyclopedia of Medical Decision Making (Ed. Michael Kattan). Thousand Oakes: SAGE.
- Aboud, S., Msamanga, G, Read, J. S., Mwatha, A., Chen, Y. Q., Potter, D., Valentine, M., Sharma, U., Taha, T. E., Goldnenberg, R. L.,
Fawzi, W. W. (2008)
Genital Tract Infections among HIV-Infected Pregnant Women in Malawi, Tanzania and Zambia, International Journal of STD & AIDS,
12: 824-832.
- Chasela, C., Chen, Y. Q., Fiscus, S., Hoffman, I., Young, A., Valentine, M., Emel, L., Taha, T. E., Goldenberg, R., Reid, J. S. (2008)
Risk factors for late postnatal transmission of Human Immunodeficiency Virus Type 1 in Sub-Saharan Africa,
Pediatric Infectious Diseases Journal, 27, 251-256.
- Chen, Y. Q., Yang, J., Cheng, S., Brooks, J. B. (2007) Estimating a treatment
effect with repeated measurements accounting for varying effectiveness
duration, Biometrika, 94: 387-402.
- Chen, Y. Q. (2007) Additive expectancy regression, Journal of the American Statistical Association, 102: 153-166.
- Long, F., Chen, Y. Q., Cheverud, J. M., Wu, R. (2006)
Genetic mapping of allometric scaling laws, Genetical Research, 87: 207-216.
- Chen, Y. Q., Hu, C., Wang, Y. (2006) Attributable
risk function in the proportional hazards model for censored time-to-event,
Biostatistics, 7: 515-529.
- Chen, Y. Q., Cheng, S. (2006) Linear
life expectancy regression with censored data, Biometrika, 93:
303-313.
- Chen, Y. Q., Cheng, S. (2005) Semiparametric
analysis of mean residual life with censored survival data, Biometrika,
92: 19-29.
- Chen, Y. Q., Jewell, N. P., Lei, X., Cheng, S. (2005) Semiparametric
estimation of proportional mean residual model in presence of censoring,
Biometrics, 61: 170-178.
- Zhao, W., Chen, Y. Q., Casella, G., Cleverudz, J. M.,
Wu, R. (2005) Structured
antedependence models for functional mapping of longitudinal quantitative
trait, Bioinformatics, 21: 2469-2477.
- Guendelman, S., Meade, K., Chen, Y. Q., Benson, M. (2004)
Asthma
control and hospitalizations among inner-city children: results of a randomized
trial of the health buddy interactive device, Telemedicine Journal
and E-health, 10(S2): S-6-S-14.
- Kent, C. K., Chaw, J. K., Kohn R. P., Chen, Y. Q., Klausner,
J. D. (2004) Studies relying on passive retrospective cohorts developed from health services
data provide biased estimates of incidence of sexually transmitted infections,
Sexually Transmitted Diseases, 31:596-600.
- Chen, Y. Q., Wang, M.-C., Huang, Y. (2004) Semiparametric
regression analysis on longitudinal pattern of recurrent gap times,
Biostatistics, 5: 277-290.
- Chen, Y. Q., Jewell, N. P., Yang, J. (2003) Accelerated
hazards model: method, theory and applications, Handbook of Statistics
on Survival Analysis, Amsterdam: North-Holland.
- Chen, Y. Q., Pong, A., Xing, B. (2003) Rank
regression in stability analysis, Journal of Biopharmaceutical
Statistics, 13:463-479.
- Huang, Y., Chen, Y. Q. (2003) Marginal
regression of gaps between recurrent events, Lifetime Data Analysis,
9:293-303.
- Lin, M. C., Soliman, G. N., Song, M., Smith, J. P., Lin, C. T.,
Chen, Y. Q., Polse, K. A. (2003) Soft
contact lens extended wear affects corneal epithelial permeability: hypoxic
or mechanical etiology? Contact Lens & Anterior Eye, 26:11-16.
- Lin, M. C., Chen, Y. Q., Polse, K. A. (2003) The
effects of ocular and lens parameters on the postlens tear thickness,
Eye & Contact Lens: Science and Clinical Practice, 29(1):
S33-S36.
- Pong, A., Chen, Y. Q., Lei, X. (2003) Semiparametric
rank regression methods in stability analysis, Encyclopedia of
Biopharmaceutical Statistics, New York: Dekker.
- Gaffikin, L., Ahmed, S., Chen, Y. Q., McGrath, J. M., Blumenthal,
P. D. (2003) Risk
factors as the basis for triage in low-resource cervical cancer screening
programs, International Journal of Gynecology & Obstetrics,
80: 41-47.
- Guendelman, S., Meade, K., Benson, M., Chen, Y. Q., Samuels,
S. (2002) Improving
asthma outcomes and self-management behaviors of inner city children,
Archives of Pediatrics & Adolescent Medicine, 156:114-120.
- Chen, Y. Q., Rohde, C. A., Wang, M.-C. (2002) Additive
hazards models with latent treatment effectiveness lag time, Biometrika,
89: 914-931.
- Chen, Y. Q., Wang, M.-C., Huang, Y. (2002) Analysis of
recurrent event data: inference based on reduced risksets, Communications
of the 3rd International Conference on Mathematical Methods in Reliability.
(Eds. H. Langseth & B. Lindqvist). 147-150. Trondheim, Norway.
- Chen, Y. Q., Jewell, N. P. (2001) On a
general class of hazards regression models, Biometrika, 88:687-702.
- Chen, Y. Q. (2001) Acelerated
hazards regression model and its adequacy for censored survival data,
Biometrics, 57:853-860.
- Wang, M.-C., Chen, Y. Q. (2001) Comment on Lin/Ying: Semiparametric
and nonparametric regression analysis of longitudinal data, Journal
of the American Statistical Association, 96:113-114.
- Wang, M.-C., Chen, Y. Q. (2000)
Nonparametric and semiparametric trend analysis for stratified recurrence
time data, Biometrics, 56:789-794.
- Chen, Y. Q., Wang, M.-C. (2000) Estimating
a treatment effect with the accelerated hazards model, Controlled
Clinical Trials, 21:369-380.
- Chen, Y. Q., Wang, M.-C. (2000) Analysis
of accelerated hazards model, Journal of the American Statistical
Association, 95:608-618.
- Brookmeyer, R., Chen, Y. Q. (1998) Person-time
analysis of paired community intervention trials when the number of communities
is small, Statistics in Medicine, 17:2121-32.
Technical Reports:
- Chen, Y. Q., Wang, Y. (2005) Linear regression of censored
length-biased lifetimes, UW Biostatistics Technical Report,
258.
- Chen, Y. Q., Zhao, Y. (2004) A note on empirical likelihood
inference of residual life regression, UC Berkeley Biostatistics
Technical Report, 153.
- Chen, Y. Q., Hu, C., Wu, R. (2004) Semiparametric Quantitative-Trait-Locus
Mapping: II. on Censored Age-at-Onset, UC Berkeley Biostatistics
Technical Report, 152.
- Chen, Y. Q., Wu, R. (2004) Semiparametric Quantitative-Trait-Locus
Mapping: I. on Functional Growth Curves, UC Berkeley Biostatistics
Technical Report, 151.
- Chen, Y. Q., Wang, M.-C., Eaton, W. (2001) Detection of progressive
deterioration in early onset schizophrenia with a new statistical method,
UC Berkeley Biostatistics Technical Report, 102.
- Chirenji, Z. M., Chipato, T., Kasule, J., Rusakaniko, S., Makunike,
R., Ngwalle, E., Gaffikin, L., Blumethal, P. D., McGrath, J., Sanghvi,
H., Brechin, S. J. G.,Chen, Y. Q. (1999) Visual inspection
as a means of primary testing for cervical cancer: results from a large-scale
study in Zimbabwe, JHPIEGO Technical Report, JHP-05.
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Last modified: June, 2009